Oilseed Rape
Brassica napus (also known as oilseed rape) is the third largest oilseed
crop in the world, providing 12% of the world’s supply of vegetable
oil in 2007. B.napus seed contains approximately 40-45% oil on a dry weight
basis. Global characterization of proteins expressed during B. napus seed
development will provide a foundation for uncovering temporal relationships
between metabolic enzyme expression and oil production.
High resolution two-dimensional gel electrophoresis was used to profile
protein expression in seed 2, 3, 4, 5 and 6 weeks after flowering. Two-dimensional
gel protein reference maps for proteins with pI values between 4 and 7
(gel pI 4-7) and 7 to
10 (gel pI 3-10) are available
as well as a table of protein assignments classified according to function
(Protein table).
These proteome reference maps contain clickable spots linked to expression
profiles and protein identification data.
- Metabolism
- Amino Acids
- 3-isopropylmalate dehydrogenase
- 3-isopropylmalate dehydrogenase
- aconitate hydratase, cytoplasmic
- aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative
- homologue to aminoacylase / N-acyl-L-amino-acid amidohydrolase (plastid)
- aspartate aminotransferase
- aspartate aminotransferase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cobalamin-independent methionine synthase
- cysteine desulfurase
- cysteine synthase
- delta-1-pyrroline-5-carboxylate dehydrogenase precursor
- delta-1-pyrroline-5-carboxylate dehydrogenase precursor
- delta-1-pyrroline-5-carboxylate dehydrogenase precursor
- delta-1-pyrroline-5-carboxylate dehydrogenase precursor
- glutamate dehydrogenase (cytosolic)
- glutamate dehydrogenase (cytosolic)
- glutamine synthetase (cytosolic)
- homologue to aspartate aminotransferase
- homologue to aspartate aminotransferase
- homologue to glutamate dehydrogenase 1
- homologue to glycine hydroxymethyltransferase
- homologue to glycine hydroxymethyltransferase
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to NADP-isocitrate dehydrogenase (cytosolic)
- homologue to thiazole biosynthetic enzyme plastid precursor
- NAD-dependent isocitrate dehydrogenase alpha subunit (cytosolic)
- NAD-dependent isocitrate dehydrogenase alpha subunit (cytosolic)
- O-acetylserine(thiol) lyase (cysteine synthase)
- O-acetylserine(thiol) lyase (cysteine synthase)
- S-adenosylmethionine synthetase
- similar to putative cysteine synthase
- Nitrogen and sulphur
- Ni-binding urease accessory protein UreG
- Nucleotides
- adenosine kinase 1 (ADK1) / adenosine 5'-phosphotransferase 1
- adenosine kinase 1 (ADK1) / adenosine 5'-phosphotransferase 1
- adenosine kinase 1 (ADK1) / adenosine 5'-phosphotransferase 1
- Phosphate
- Polysaccharide catabolism
- beta-glucosidase
- beta-glucosidase
- beta-glucosidase homolog
- beta-glucosidase homolog
- Sugars and polysaccharides
- homologue to NADPH-dependent mannose 6-phosphate reductase
- sucrose synthase / sucrose-UDP glucosyltransferase (SUS2)
- homologue to sucrose synthase
- homologue to sucrose synthase
- homologue to dTDP-glucose 4-6-dehydratase (UDP-glucuronic acid decarboxylase)
- homologue to dTDP-glucose 4-6-dehydratase-like protein
- homologue to starch phosphorylase H (cytosolic form)-like protein
- homologue to starch phosphorylase H (cytosolic form)-like protein
- homologue to UDP-glucose 4-epimerase
- 1421r
- homologue to UTP--glucose-1-phosphate uridylyltransferase
- homologue to xylose isomerase family protein
- lactoylglutathione lyase (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I)
- similar to 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein
- UDP-glucose pyrophosphorylase
- UDP-glucose pyrophosphorylase
- Lipid
- acyl-[acyl-carrier protein] desaturase
- acyl-[acyl-carrier protein] desaturase
- acyl-[acyl-carrier protein] desaturase
- ATP-citrate lyase subunit B
- beta-ketoacyl-ACP synthetase 1
- biotin carboxylase
- biotin carboxylase
- dihydrolipoamide S-acetyltransferase (plastid)
- homologue to pyruvate dehydrogenase E1 alpha subunit (chloroplast)
- enoyl Acyl Carrier Protein Reductase
- enoyl Acyl Carrier Protein Reductase
- enoyl Acyl Carrier Protein Reductase
- enoyl Acyl Carrier Protein Reductase
- F Chain F, Stearoyl-Acyl Carrier Protein Desaturase
- F Chain F, Stearoyl-Acyl Carrier Protein Desaturase
- F Chain F, Stearoyl-Acyl Carrier Protein Desaturase
- myo-inositol-1-phosphate synthase
- plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase
- similar to putative malonyl-CoA:acyl carrier protein transacylase
- Sterols
- homologue to 11-beta-hydroxysteroid dehydrogenase-like
- homologue to 11-beta-hydroxysteroid dehydrogenase-like
- homologue to farnesyl-diphosphate farnesyltransferase (Squalene synthetase) - sterol biosynthesis
- Cofactors
- ThiJ-like protein
- Energy
- Glycolysis
- cytosolic phosphoglucomutase
- phosphoglucomutase, cytoplasmic 1
- homologue to phosphoglucomutase (cytosolic)
- homologue to phosphoglucomutase (cytosolic)
- homologue to phosphoglucomutase (cytosolic)
- phosphoglucomutase, cytoplasmic 1
- cytosolic phosphoglucose isomerase
- cytosolic phosphoglucose isomerase
- putative fructokinase 1
- enolase
- enolase
- fructose bisphosphate aldolase-like protein
- similar to glyceraldehyde 3-phosphate dehydrogenase (chloroplast)
- glyceraldehyde 3-phosphate dehydrogenase (cytosolic)
- glyceraldehyde 3-phosphate dehydrogenase (cytosolic)
- glyceraldehyde 3-phosphate dehydrogenase (cytosolic)
- glyceraldehyde 3-phosphate dehydrogenase (cytosolic)
- glyceraldehyde 3-phosphate dehydrogenase (cytosolic)
- homologue to pyrophosphate-dependent phosphofructokinase alpha subunit (cytosolic)
- homologue to pyrophosphate-dependent phosphofructokinase alpha subunit (cytosolic)
- homologue to pyrophosphate-dependent phosphofructokinase beta subunit (chloroplast)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose bisphosphate aldolase (cytosolic)
- homologue to fructose-bisphosphate aldolase (chloroplast)
- homologue to fructose-bisphosphate aldolase (chloroplast)
- similar to fructose bisphosphate aldolase (chloroplast)
- Fructose-bisphosphate aldolase 2 (chloroplast)
- Fructose-bisphosphate aldolase 2 (chloroplast)
- Fructose-bisphosphate aldolase 2 (chloroplast)
- Fructose-bisphosphate aldolase 2 (chloroplast)
- Fructose-bisphosphate aldolase 2 (chloroplast)
- homologue to phosphoglycerate kinase (cytosolic)
- homologue to phosphoglycerate kinase (cytosolic)
- phosphoglycerate kinase, chloroplast precursor
- phosphoglycerate kinase, chloroplast precursor
- homologue to putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (cytosolic)
- homologue to pyruvate kinase isozyme G, chloroplast precursor
- homologue to triosephosphate isomerase cytosolic
- triose-phosphate isomerase, cytosolic
- triose-phosphate isomerase, cytosolic
- triose-phosphate isomerase, cytosolic
- triose-phosphate isomerase, cytosolic
- triose-phosphate isomerase, cytosolic
- triose-phosphate isomerase, cytosolic
- Gluconeogenesis
- homologue to malate dehydrogenase cytoplasmic 1
- homologue to malate dehydrogenase cytoplasmic 1
- homologue to malate dehydrogenase cytoplasmic 1
- homologue to malate dehydrogenase cytoplasmic 1
- Pentose phosphate
- 6-phosphogluconate dehydrogenase family protein
- homologue to 6-phosphogluconate dehydrogenase family protein
- homologue to transaldolase-like protein (transaldolase activity)
- phosphogluconate dehydrogenase (decarboxylating)
- phosphoglycerate dehydrogenase-like protein
- phosphoglycerate dehydrogenase-like protein
- sedoheptulose-bisphosphatase precursor (chloroplast)
- TCA pathway
- 2-oxoglutarate dehydrogenase, E3 subunit (mitochondria)
- fumarase; fumarate hydratase (mitochondria)
- homologue to aconitase family protein (mitochondria)
- homologue to lipoamide dehydrogenase precursor (mitochondrial)
- malate dehydrogenase, mitochondrial precursor
- malate dehydrogenase, mitochondrial precursor
- Respiration
- ATP synthase alpha chain, mitochondrial
- ATP synthase alpha chain, mitochondrial
- ATP synthase D chain mitochondrial
- homologue to ATP synthase beta chain 1 mitochondrial precursor
- homologue to succinate dehydrogenase flavoprotein alpha subunit
- mitochondrial F1 ATP synthase beta subunit
- mitochondrial F1 ATP synthase beta subunit
- similar to ATP synthase delta chain, mitochondrial
- similar to putative ATP synthase 24 kDa subunit, mitochondrial precursor
- similar to putative ATP synthase 24 kDa subunit, mitochondrial precursor
- similar to putative ATP synthase 24 kDa subunit, mitochondrial precursor
- Fermentation
- Electron-transport
- cytochrome P450-like protein
- cytochrome P450-like protein
- homologue to ferredoxin-NADP+ reductase
- NADH dehydrogenase (mitochodnrial)
- putative NADPH quinone oxidoreductase
- similar to oxidoreductase family protein
- similar to oxidoreductase family protein
- similar to probable electron transport flavoprotein
- Photosynthesis
- ATPase alpha subunit (choroplast)
- ATPase alpha subunit (choroplast)
- ATPase, beta subunit, chloroplast
- ATP synthase beta subunit (chloroplast)
- ATP synthase beta subunit (chloroplast)
- ATP synthase beta subunit (chloroplast)
- ATP synthase beta subunit (chloroplast)
- ATP synthase beta subunit (chloroplast)
- ATP synthase gamma chain, chloroplast precursor
- carboxylase oxygenase L,RBP
- carboxylase oxygenase L,RBP
- ribulose 1,5-bisphosphate carboxylase/oxygenase large chain
- ribulose bisphosphate carboxylase/oxygenase activase
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit
- homologue to RuBisCO subunit binding-protein alpha subunit chloroplast precursor
- homologue to RuBisCO subunit binding-protein alpha subunit chloroplast precursor
- ferredoxin--NADP reductase, chloroplast precursor
- homologe to oxidoreductase family protein (plastid)
- homologue to oxygen-evolving enhancer protein 1-1 plastid precursor
- homologue to oxygen-evolving enhancer protein 1-1 plastid precursor
- homologue to oxygen-evolving enhancer protein 2 plastid precursor
- homologue to phosphoribulokinase chloroplast precursor
- homologue to phosphoribulokinase chloroplast precursor
- phosphoribulokinase precursor , chloroplast
- oxygen evolving enhancer protein 1 precursor
- water-soluble chlorophyll protein
- water-soluble chlorophyll protein
- water-soluble chlorophyll protein
- Cell growth/division
- Cell growth
- Meiosis
- DNA synth/replication
- DEAD/DEAH box helicase, putative (RH15)
- homologue to elongation factor 1B alpha-subunit
- homologue to elongation factor Tu plastid precursor
- homologue to elongation factor Tu mitochondrial precursor
- similar to non-LTR retroelement reverse transcriptase-like
- Recombination/repair
- Cell cycle
- crooked neck-like protein
- Cytokinesis
- Growth regulators
- Seed maturation
- homologue to to late embryogenesis abundant proteins
- late embryogenesis abundant protein
- late embryogenesis abundant protein
- late embryogenesis abundant protein
- late embryogenesis abundant protein
- putative late embryogenesis abundant protein
- putative late embryogenesis abundant protein
- putative seed maturation protein
- putative seed maturation protein
- similar to embryo-specific protein
- similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein
- similar to late embryogenesis abundant protein-like
- similar to LEA-like protein
- similar to LEA-like protein
- similar to probable seed maturation protein
- similar to seed maturation protein LEA protein in group 5-like
- Other
- Transcription
- rRNA synthesis
- tRNA synthesis
- mRNA synthesis
- RAD23-like protein
- General TFs
- Specific TFs
- Chromatin modification
- mRNA processing
- RNA transport
- Protein synthesis
- Ribosomal proteins
- 40S ribosomal protein SA
- 40S ribosomal protein SA
- 40S ribosomal protein SA
- 40S ribosomal protein SA
- 40S ribosomal protein SA
- Translation factors
- Translation control
- tRNA synthases
- Others
- Protein destination and storage
- Folding and stability
- chaperonin 10
- chaperonin 10
- chaperonin 10
- cytosolic chaperonin, delta-subunit
- heat shock cognate protein HSC70
- heat shock cognate protein HSC70
- heat shock cognate protein HSC70
- heat shock cognate protein HSC70
- heat shock protein 60
- heat shock protein 70 (Hsc70-5)
- heat shock protein hsp70
- heat shock protein hsp70
- heat shock protein hsp70
- homologue to protein disulfide-isomerase A6 precursor
- homologue to protein disulfide-isomerase A6 precursor
- homologue to chaperonin
- homologue to chaperonin
- homologue to disulfide-isomerase 1 precursor
- peptidylprolyl isomerase
- peptidylprolyl isomerase
- protein disulfide isomerase
- protein disulfide isomerase
- putative chaperonin
- similar to disulfide-isomerase 2 precursor
- similar to disulfide-isomerase 2 precursor
- similar to disulfide-isomerase 2 precursor
- similar to cyclophilin
- Targeting
- Modification
- Complex assembly
- chaperonin 60 beta precursor
- chaperonin 60 beta precursor
- chaperonin 60 beta precursor
- chaperonin 60 beta precursor
- chaperonin 60 beta precursor
- putative TCP-1/cpn60 chaperonin family protein
- putative TCP-1/cpn60 chaperonin family protein
- Proteolysis
- 20S proteasome alpha subunit B
- 20S proteasome alpha subunit D1
- 20S proteasome subunit
- 26S proteasome AAA-ATPase subunit RPT1a
- 26S proteasome regulatory particle triple-A ATPase subunit1b
- 26S proteasome regulatory particle triple-A ATPase subunit3
- 26S proteasome regulatory particle triple-A ATPase subunit4b
- homologue to 20S proteasome alpha subunit A2
- homologue to 20S proteasome alpha subunit A2
- homologue to 20S proteasome alpha subunit C
- homologue to 26S proteasome non-ATPase regulatory subunit
- homologue to 26S proteasome subunit RPN12
- homologue to ATP-dependent Clp protease ATP-binding sub
- homologue to ubiquitin-conjugating enzyme-like protein
- multicatalytic endopeptidase complex proteasome beta subunit
- multicatalytic endopeptidase complex, proteasome component, alpha subunit
- putative ubiquitin-conjugating enzyme protein
- similar to subtilisin proteinase-like
- similar to subtilisin proteinase-like
- similar to cysteine endopeptidase
- similar to cysteine endopeptidase
- similar to serine carboxypeptidase I-like protein
- similar to serine carboxypeptidase I-like protein
- similar to serine carboxypeptidase I-like protein
- similar to vacuolar processing enzyme/asparaginyl endopeptidase
- Ulp1 protease family protein
- ubiquitin carboxyl-terminal hydrolase-related
- Storage proteins
- cruciferin
- cruciferin
- cruciferin
- cruciferin
- cruciferin
- cruciferin / cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin cru2/3 subunit
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin CRU4 precursor (11S globulin) (12S storage protein)
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin cru4 subunit
- cruciferin precursor / cruciferin subunit
- cruciferin precursor / cruciferin subunit
- cruciferin precursor / cruciferin subunit
- cruciferin precursor / cruciferin subunit
- cruciferin precursor / cruciferin subunit
- cruciferin precursor / cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- cruciferin subunit
- similar to probable seed storage protein (vicilin-like)
- similar to putative cruciferin 12S seed storage protein
- similar to putative cruciferin 12S seed storage protein
- similar to putative cruciferin 12S seed storage protein
- similar to putative cruciferin 12S seed storage protein
- Transporters
- Ions
- Sugars
- Amino Acids
- Lipids
- Purine/pyrimides
- Transport ATPases
- ABC-type
- Others
- Intracellular traffic
- Nuclear
- plastid
- homologue to plastid import-associated channel protein
- Mitochondrial
- homologue to mitochondrial processing peptidase
- mitochondrial processing peptidase beta subunit
- Vesicular
- Perixosomal
- Vacuolar
- Extracellular
- Import
- Others
- Cell structure
- Cell Wall
- cellulose synthase catalytic subunit
- Cytoskeleton
- ER/Golgi
- homologue to Luminal binding protein 2 precursor
- Nucleus
- Chromosomes
- structural maintenance of chromosomes (SMC) family protein
- Mitochondria
- Perixosome
- Vacuole
- plastid
- Others
- Signal transduction
- Receptors
- Mediators
- Kinases
- Phosphatases
- G proteins
- Others
- annexin
- annexin
- annexin
- homologue to annexin
- homologue to annexin
- homologue to annexin
- similar to annexin
- homologue to Ca2+-dependent membrane-binding protein annexin
- homologue to Ca2+-dependent membrane-binding protein annexin
- homologue to Ca2+-dependent membrane-binding protein annexin
- 14-3-3-LIKE PROTEIN A
- homologue to 14-3-3-like protein GF14 epsilon
- homologue to 14-3-3-like protein GF14 kappa
- homologue to 14-3-3-like protein GF14 nu (General regulatory factor 7)
- homologue to 14-3-3-like protein GF14 nu (General regulatory factor 7)
- homologue to 14-3-3-like protein GF14 nu (General regulatory factor 7)
- GF14 lambda
- Disease/defense
- Resistance genes
- disease resistance protein (TIR-NBS-LRR class), putative
- Defense-related
- jasmonate inducible protein; myrosinase binding protein-like
- jasmonate inducible protein; myrosinase binding protein-like
- jasmonate inducible protein; myrosinase binding protein-like
- jasmonate inducible protein; myrosinase binding protein-like
- myrosinase
- myrosinase
- myrosinase
- myrosinase
- myrosinase


